Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA1804
|
Name |
hupB
|
Replicon | chromosome |
Genomic location | 1958759 - 1959031 (+ strand) |
Transposon Mutants | 1 transposon mutants in PAO1 |
RefSeq | NP_250495.1 |
GI | 15597001 |
Affymetrix | PA1804_hupB_at |
Entrez | 878308 |
GenBank | AAG05193.1 |
INSDC | AAG05193.1 |
NCBI Locus Tag | PA1804 |
protein_id(GenBank) | gb|AAG05193.1|AE004606_7|gnl|PseudoCAP|PA1804 |
TIGR | NTL03PA01805 |
UniParc | UPI0000128EF9 |
UniProtKB Acc | P05384 |
UniProtKB ID | DBHB_PSEAE |
UniRef100 | UniRef100_P05384 |
UniRef50 | UniRef50_P96045 |
UniRef90 | UniRef90_P05384 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
DNA-binding protein HU
|
Synonyms | |
Evidence for Translation |
Detected by two-dimensional gel electrophoresis, mass spectral analysis and protein mass mapping (PMID:21863142).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (9.09 kDa, PMID:21751344)
|
Charge (pH 7) | 5.98 |
Kyte-Doolittle Hydrophobicity Value | 0.177 |
Molecular Weight (kDa) | 9.1 |
Isoelectric Point (pI) | 10.79 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 569 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003593 (526 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA1804
Search term: hupB
Search term: DNA-binding protein HU
|
The Pseudomonas aeruginosa global regulator MvaT specifically binds to the ptxS upstream region and enhances ptxS expression.
Westfall LW, Luna AM, Francisco MS, Diggle SP, Worrall KE, Williams P, Cámara M, Hamood AN
Microbiology (Reading) 2004 Nov;150(Pt 11):3797-3806
PubMed ID: 15528665
|
A single DNA-binding protein from Pseudomonas aeruginosa homologous to proteins NS1 and NS2 (HU proteins) of Escherichia coli and other bacteria.
Hawkins AR, Wootton JC
FEBS Lett 1981 Aug 3;130(2):275-8
PubMed ID: 6793399
|
HU-1 mutants of Escherichia coli deficient in DNA binding.
Goshima N, Kohno K, Imamoto F, Kano Y
Gene 1990 Nov 30;96(1):141-5
PubMed ID: 2265752
|
Cloning and sequence analyses of the genes coding for the integration host factor (IHF) and HU proteins of Pseudomonas aeruginosa.
Delic-Attree I, Toussaint B, Vignais PM
Gene 1995 Feb 27;154(1):61-4
PubMed ID: 7867950
|
Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|