Pseudomonas aeruginosa PAO1, PA3442

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3442
Name
Synonym: ycbE
Synonym: ssuB
Replicon chromosome
Genomic location 3847974 - 3848798 (- strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_252132.1
GI 15598638
Affymetrix PA3442_at
Entrez 879100
GenBank AAG06830.1
INSDC AAG06830.1
NCBI Locus Tag PA3442
protein_id(GenBank) gb|AAG06830.1|AE004765_3|gnl|PseudoCAP|PA3442
TIGR NTL03PA03442
UniParc UPI00000C5A13
UniProtKB Acc Q9HYG4
UniProtKB ID SSUB1_PSEAE
UniRef100 UniRef100_Q9HYG4
UniRef50 UniRef50_Q9HYG4
UniRef90 UniRef90_Q9HYG4

Product

Feature Type CDS
Coding Frame 1
Product Name
probable ATP-binding component of ABC transporter
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 2.94
Kyte-Doolittle Hydrophobicity Value -0.015
Molecular Weight (kDa) 29.8
Isoelectric Point (pI) 9.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002193 (515 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3442

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 8.3e-17
Percent Identity: 34.3
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 8.3e-17
Percent Identity: 34.3
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 8.3e-17
Percent Identity: 34.3
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 8.3e-17
Percent Identity: 34.3

References

No references are associated with this feature.