Pseudomonas aeruginosa PAO1, PA3478 (rhlB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3478
Name
rhlB
Replicon chromosome
Genomic location 3890775 - 3892055 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_252168.1
GI 15598674
Affymetrix PA3478_rhlB_at
Entrez 878954
GenBank AAG06866.1
INSDC AAG06866.1
NCBI Locus Tag PA3478
protein_id(GenBank) gb|AAG06866.1|AE004768_11|gnl|PseudoCAP|PA3478
TIGR NTL03PA03478
UniParc UPI00000C5A2F
UniProtKB Acc Q9HYD1
UniProtKB ID Q9HYD1_PSEAE
UniRef100 UniRef100_Q9HYD1
UniRef50 UniRef50_Q9HYD1
UniRef90 UniRef90_Q9HYD1

Product

Feature Type CDS
Coding Frame 1
Product Name
rhamnosyltransferase chain B
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) 9.31
Kyte-Doolittle Hydrophobicity Value 0.014
Molecular Weight (kDa) 47.1
Isoelectric Point (pI) 8.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Virulence Evidence

Source 1
Database Victors : 4223
Category Rhamnolipid biosynthesis
Evidence ECO:0000315
mutant phenotype evidence used in manual assertion
Host Organism Rattus norvegicus
Notes
Infection model Rat agar bead model of chronic lung infection
Reference 14641575
Source 2
Database VFDB : VF0089
Category Rhamnolipid biosynthesis
Evidence
Host Organism
Notes
Reference

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 144 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002164 (303 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3478
Search term: rhlB

Human Homologs

References

No references are associated with this feature.