Motif View

Internal ID 17655792
Source Database TransTermHP TERM 300
Feature Type terminator
Name
Rho-independent transcription terminator TERM 300
Sequence GGCCCGATATCGACGATATCGGGCC
Look for more occurrences
Start 1164055
End 1164079
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGAAGCATGGGAAA(5' tail) GGCCCGATATC(5' stem) GAC(loop) GATATCGGGCC(3' stem) TTTTTTCGTTTGCCG(3' tail). Confidence: 100. opp_overlap 1164055

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685