Motif View

Internal ID 17655878
Source Database TransTermHP TERM 435
Feature Type terminator
Name
Rho-independent transcription terminator TERM 435
Sequence GCCCGGCACCAGGCCGGGC
Look for more occurrences
Start 1895244
End 1895262
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCGGCCCATGAAAAA(5' tail) GCCCGGC(5' stem) CTGGT(loop) GCCGGGC(3' stem) TTTTTCATGGCTGGC(3' tail). Confidence: 100. opp_overlap 1895244

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685