Motif View

Internal ID 17656120
Source Database TransTermHP TERM 806
Feature Type terminator
Name
Rho-independent transcription terminator TERM 806
Sequence GGCCCCTTCGGGGGCC
Look for more occurrences
Start 3569071
End 3569086
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCAGGCATGAAAAA(5' tail) GGCCCC(5' stem) CGAA(loop) GGGGCC(3' stem) TTTCCAGGGCGCTTT(3' tail). Confidence: 100. opp_overlap 3569071 3569082

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685