Motif View

Internal ID 17656123
Source Database TransTermHP TERM 809
Feature Type terminator
Name
Rho-independent transcription terminator TERM 809
Sequence GGCCCGCCCGAGCGTTTCGGGCGGGCC
Look for more occurrences
Start 3575853
End 3575879
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCGCCGGAAAAAAAC(5' tail) GGCCCGCCCGAA(5' stem) ACG(loop) CTCGGGCGGGCC(3' stem) CAGGCACAACACCGG(3' tail). Confidence: 100. overlap 3575852 3575866 3575867

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685