Motif View

Internal ID 17657134
Source Database TransTermHP TERM 880
Feature Type terminator
Name
Rho-independent transcription terminator TERM 880
Sequence CCCTCCGTGCAGAGGG
Look for more occurrences
Start 3840491
End 3840506
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAACAGAAAACAAAA(5' tail) CCCTC(5' stem) TGCACG(loop) GAGGG(3' stem) CACTTACACAAACAA(3' tail). Confidence: 91.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685