Motif View

Internal ID 17657249
Source Database TransTermHP TERM 1067
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1067
Sequence GTGGCACAAACGTCCGCGACGCCTCGCGCTGTTTGTGCCAC
Look for more occurrences
Start 4678590
End 4678630
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCACTCAATAAAAAA(5' tail) GTGGCACAAACA-GCGCGA(5' stem) GGCG(loop) TCGCGGACGTTTGTGCCAC(3' stem) CTCTGACGGATAGCG(3' tail). Confidence: 100. gap 1, opp_overlap 4678610

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685