Pseudomonas putida F1, Pput_2113

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF82784 IPR036102 OsmC/Ohr superfamily 1 129 2.22E-20
Gene3D G3DSA:1.10.490.140 325 542 4.4E-9
Pfam PF18381 YcaO cyclodehydratase C-terminal domain IPR041080 YcaO cyclodehydratase, C-terminal 555 726 1.9E-73
TIGRFAM TIGR03549 TIGR03549: YcaO domain protein IPR019938 YcaO domain protein 2 726 0.0
Gene3D G3DSA:3.30.300.20 IPR015946 K homology domain-like, alpha/beta 3 131 7.8E-15
Coils Coil 717 728 -
Pfam PF02566 OsmC-like protein IPR003718 OsmC/Ohr family 32 126 1.2E-9
Gene3D G3DSA:3.30.160.660 361 492 4.4E-9
TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain IPR003776 YcaO-like domain 157 549 1.2E-93
ProSiteProfiles PS51664 YcaO domain profile. IPR003776 YcaO-like domain 204 572 44.477
Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IPR003776 YcaO-like domain 203 538 5.6E-70

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.