Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA1902
|
Name |
phzD2
|
Replicon | chromosome |
Genomic location | 2072935 - 2073558 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_250593.1 |
GI | 15597099 |
Affymetrix | PA1902_s_at |
DNASU | PaCD00006856 |
Entrez | 881873 |
GenBank | AAG05291.1 |
NCBI Locus Tag | PA1902 |
protein_id(GenBank) | gb|AAG05291.1|AE004616_5|gnl|PseudoCAP|PA1902 |
TIGR | NTL03PA01903 |
UniProtKB Acc | Q7DC80 |
UniProtKB ID | Q7DC80_PSEAE |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
phenazine biosynthesis protein PhzD
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -3.89 |
Kyte-Doolittle Hydrophobicity Value | -0.094 |
Molecular Weight (kDa) | 23.2 |
Isoelectric Point (pI) | 5.63 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
1NF9 | HYDROLASE | 12/13/02 | Crystal Structure of PhzD protein from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.5 | X-RAY DIFFRACTION | 100.0 |
1NF8 | HYDROLASE | 12/13/02 | Crystal structure of PhzD protein active site mutant with substrate | Pseudomonas aeruginosa | 1.6 | X-RAY DIFFRACTION | 99.5 |
Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.
Drug Name | Source Accession | Source DB | Version | Target Accession | Target Description | Percent Identity | Alignment Length | E-Value |
Isochorismic Acid | DB02793 | DrugBank | 5.1.4 | Q7DC80 | Phenazine biosynthesis protein PhzD | 100.0 | 207 | 3.6e-116 |
Formic acid | DB01942 | DrugBank | 5.1.4 | Q7DC80 | Phenazine biosynthesis protein PhzD | 100.0 | 207 | 3.6e-116 |
Source 1 | |
Database | VFDB |
Category | Phenazine biosynthesis |
Evidence |
|
Host Organism | |
Notes | |
Reference |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 231 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001494 (1079 members) |
Putative Inparalogs |
1 predicted inparalogs phenazine biosynthesis protein PhzD (PA4213) 100.0% identity |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA1902
Search term: phzD2
Search term: phenazine biosynthesis protein PhzD
|
Functional analysis of genes for biosynthesis of pyocyanin and phenazine-1-carboxamide from Pseudomonas aeruginosa PAO1.
Mavrodi DV, Bonsall RF, Delaney SM, Soule MJ, Phillips G, Thomashow LS
J Bacteriol 2001 Nov;183(21):6454-65
PubMed ID: 11591691
|
Molecular analysis of genes encoding phenazine biosynthesis in the biological control bacterium. Pseudomonas aureofaciens 30-84.
Pierson LS 3rd, Gaffney T, Lam S, Gong F
FEMS Microbiol Lett 1995 Dec 15;134(2-3):299-307
PubMed ID: 8586283
|