Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2622
|
Name |
cspD
|
Replicon | chromosome |
Genomic location | 2965201 - 2965473 (+ strand) |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_251312.1 |
GI | 15597818 |
Affymetrix | PA2622_cspD_at |
Entrez | 882328 |
GenBank | AAG06010.1 |
INSDC | AAG06010.1 |
NCBI Locus Tag | PA2622 |
protein_id(GenBank) | gb|AAG06010.1|AE004691_1|gnl|PseudoCAP|PA2622 |
TIGR | NTL03PA02622 |
UniParc | UPI00000C5770 |
UniProtKB Acc | Q9I0L6 |
UniProtKB ID | Q9I0L6_PSEAE |
UniRef100 | UniRef100_W0YTN8 |
UniRef50 | UniRef50_A6V4G4 |
UniRef90 | UniRef90_A6V4G4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
cold-shock protein CspD
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.54 |
Kyte-Doolittle Hydrophobicity Value | -0.286 |
Molecular Weight (kDa) | 9.6 |
Isoelectric Point (pI) | 5.63 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 497 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002930 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2622
Search term: cspD
Search term: cold-shock protein CspD
|
Ensembl
110, assembly
GRCh38.p14
|
lin-28 homolog B [Source:HGNC Symbol;Acc:HGNC:32207]
E-value:
5.2e-08
Percent Identity:
37.1
|
Ensembl
110, assembly
GRCh38.p14
|
lin-28 homolog B [Source:HGNC Symbol;Acc:HGNC:32207]
E-value:
5.2e-08
Percent Identity:
37.1
|
Ensembl
110, assembly
GRCh38.p14
|
lin-28 homolog B [Source:HGNC Symbol;Acc:HGNC:32207]
E-value:
5.2e-08
Percent Identity:
37.1
|
The ATP-dependent Clp protease of Escherichia coli. Sequence of clpA and identification of a Clp-specific substrate.
Gottesman S, Clark WP, Maurizi MR
J Biol Chem 1990 May 15;265(14):7886-93
PubMed ID: 2186030
|