Pseudomonas aeruginosa PAO1, PA2627

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA2627
Name
Synonym: ycfC
Replicon chromosome
Genomic location 2971111 - 2971731 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_251317.1
GI 15597823
Affymetrix PA2627_at
DNASU PaCD00007132
Entrez 882333
GenBank AAG06015.1
INSDC AAG06015.1
NCBI Locus Tag PA2627
protein_id(GenBank) gb|AAG06015.1|AE004691_6|gnl|PseudoCAP|PA2627
TIGR NTL03PA02627
UniParc UPI00000C5774
UniProtKB Acc Q9I0L1
UniProtKB ID HFLD_PSEAE
UniRef100 UniRef100_B7UV14
UniRef50 UniRef50_Q87ZR5
UniRef90 UniRef90_B7UV14

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 8.92
Kyte-Doolittle Hydrophobicity Value -0.151
Molecular Weight (kDa) 23.0
Isoelectric Point (pI) 10.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 89 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002925 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2627

Human Homologs

References

No references are associated with this feature.