Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3002
|
Name |
mfd
|
Replicon | chromosome |
Genomic location | 3360875 - 3364321 (+ strand) |
Transposon Mutants | 5 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_251692.1 |
GI | 15598198 |
Affymetrix | PA3002_mfd_at |
Entrez | 880415 |
GenBank | AAG06390.1 |
INSDC | AAG06390.1 |
NCBI Locus Tag | PA3002 |
protein_id(GenBank) | gb|AAG06390.1|AE004725_3|gnl|PseudoCAP|PA3002 |
TIGR | NTL03PA03002 |
UniParc | UPI00000C58C0 |
UniProtKB Acc | Q9HZK3 |
UniProtKB ID | Q9HZK3_PSEAE |
UniRef100 | UniRef100_Q9HZK3 |
UniRef50 | UniRef50_Q4KFB0 |
UniRef90 | UniRef90_Q9HZK3 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
transcription-repair coupling protein Mfd
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | -18.30 |
Kyte-Doolittle Hydrophobicity Value | -0.179 |
Molecular Weight (kDa) | 128.8 |
Isoelectric Point (pI) | 5.71 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 630 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002580 (531 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3002
Search term: mfd
Search term: transcription-repair coupling protein Mfd
|
Molecular mechanism of transcription-repair coupling.
Selby CP, Sancar A
Science 1993 Apr 2;260(5104):53-8
PubMed ID: 8465200
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|