Pseudomonas aeruginosa PAO1, PA3272

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3272
Name
Synonym: lhr
Replicon chromosome
Genomic location 3663509 - 3667855 (- strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_251962.1
GI 15598468
Affymetrix PA3272_at
Entrez 882435
GenBank AAG06660.1
INSDC AAG06660.1
NCBI Locus Tag PA3272
protein_id(GenBank) gb|AAG06660.1|AE004749_9|gnl|PseudoCAP|PA3272
TIGR NTL03PA03272
UniParc UPI00000C5987
UniProtKB Acc Q9HYW9
UniProtKB ID Q9HYW9_PSEAE
UniRef100 UniRef100_Q9HYW9
UniRef50 UniRef50_Q13M86
UniRef90 UniRef90_Q02QA4

Product

Feature Type CDS
Coding Frame 1
Product Name
probable ATP-dependent DNA helicase
Product Name Confidence: Class 3
Synonyms probable large helicase-related protein (LHR)
Evidence for Translation
Charge (pH 7) -5.48
Kyte-Doolittle Hydrophobicity Value -0.178
Molecular Weight (kDa) 158.9
Isoelectric Point (pI) 6.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 592 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002341 (476 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3272

Human Homologs

References

A set of ordered cosmids and a detailed genetic and physical map for the 8 Mb Streptomyces coelicolor A3(2) chromosome.
Redenbach M, Kieser HM, Denapaite D, Eichner A, Cullum J, Kinashi H, Hopwood DA
Mol Microbiol 1996 Jul;21(1):77-96
PubMed ID: 8843436