Pseudomonas aeruginosa PAO1, PA4620

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA4620
Name
Replicon chromosome
Genomic location 5178905 - 5179444 (- strand)
Transposon Mutants 5 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253310.1
GI 15599816
Affymetrix PA4620_at
DNASU PaCD00008003
Entrez 881160
GenBank AAG08008.1
INSDC AAG08008.1
NCBI Locus Tag PA4620
protein_id(GenBank) gb|AAG08008.1|AE004876_3|gnl|PseudoCAP|PA4620
TIGR NTL03PA04621
UniParc UPI00000C5D90
UniProtKB Acc Q9HVH1
UniProtKB ID Q9HVH1_PSEAE
UniRef100 UniRef100_W0YX23
UniRef50 UniRef50_G0A9K3
UniRef90 UniRef90_A6VC12

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Detected by iTRAQ (PMID:21863142).
Charge (pH 7) -5.81
Kyte-Doolittle Hydrophobicity Value -0.355
Molecular Weight (kDa) 19.9
Isoelectric Point (pI) 5.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 350 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004274 (380 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4620

Human Homologs

Ensembl 97, assembly GRCh38.p12
xanthine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:12805]
E-value: 4.8e-14
Percent Identity: 27.4

References

Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011 ;2
PubMed ID: 21863142