Pseudomonas fluorescens A506, PflA506_5302 (tssC1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens A506
GCF_000262325.2|latest
Locus Tag
PflA506_5302
Name
tssC1
Replicon chromosome
Genomic location 5804203 - 5805699 (+ strand)

Cross-References

RefSeq YP_006326688.1
GI 387896391
Entrez 12961801
INSDC AFJ56203.1
NCBI Locus Tag PflA506_5302
UniParc UPI00025E8E63
UniProtKB Acc I2BPM0
UniProtKB ID I2BPM0_PSEFL
UniRef100 UniRef100_I2BPM0
UniRef50 UniRef50_Q4K3N7
UniRef90 UniRef90_Q4K3N7

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein TssC1
Synonyms
Evidence for Translation
Charge (pH 7) -14.27
Kyte-Doolittle Hydrophobicity Value -0.454
Molecular Weight (kDa) 55.7
Isoelectric Point (pI) 5.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5N8N STRUCTURAL PROTEIN 02/23/17 Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 PSEUDOMONAS AERUGINOSA 3.28 ELECTRON MICROSCOPY 93.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 111 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000083 (1261 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PflA506_5302
Search term: tssC1

Human Homologs

References

No references are associated with this feature.