Pseudomonas putida F1, Pput_3925

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida F1
GCF_000016865.1|latest
Locus Tag
Pput_3925
Name
Replicon chromosome
Genomic location 4419270 - 4420619 (+ strand)

Cross-References

RefSeq YP_001269233.1
GI 148549131
Entrez 5193895
NCBI Locus Tag Pput_3925

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter-like protein
Synonyms
Evidence for Translation
Charge (pH 7) -10.97
Kyte-Doolittle Hydrophobicity Value -0.245
Molecular Weight (kDa) 49.6
Isoelectric Point (pI) 5.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001312 (616 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pput_3925

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value: 1.3e-15
Percent Identity: 28.5

References

No references are associated with this feature.