Pseudomonas putida W619, PputW619_1216 (rumA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida W619
GCF_000019445.1|latest |
| Locus Tag |
PputW619_1216
|
| Name |
rumA
|
| Replicon | chromosome |
| Genomic location | 1347523 - 1348881 (+ strand) |
Cross-References
| RefSeq | YP_001748090.1 |
| GI | 170720402 |
| Entrez | 6110140 |
| NCBI Locus Tag | PputW619_1216 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
23S rRNA 5-methyluridine methyltransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 9.97 |
| Kyte-Doolittle Hydrophobicity Value | -0.169 |
| Molecular Weight (kDa) | 49326.1 |
| Isoelectric Point (pI) | 9.34 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 552 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000899 (553 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputW619_1216
Search term: rumA
Search term: 23S rRNA 5-methyluridine methyltransferase
|
Human Homologs
References
No references are associated with this feature.