Pseudomonas putida W619, PputW619_1408

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida W619
GCF_000019445.1|latest
Locus Tag
PputW619_1408
Name
Replicon chromosome
Genomic location 1548725 - 1549756 (+ strand)

Cross-References

RefSeq YP_001748282.1
GI 170720594
Entrez 6110336
INSDC ACA71913.1
NCBI Locus Tag PputW619_1408
UniParc UPI000170CE2E
UniProtKB Acc B1J5P1
UniProtKB ID B1J5P1_PSEPW
UniRef100 UniRef100_B1J5P1
UniRef50 UniRef50_Q48MZ7
UniRef90 UniRef90_Q48MZ7

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -4.09
Kyte-Doolittle Hydrophobicity Value -0.166
Molecular Weight (kDa) 38.6
Isoelectric Point (pI) 5.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 615 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004999 (389 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputW619_1408

Human Homologs

Ensembl 97, assembly GRCh38.p12
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 2.5e-104
Percent Identity: 55.5

References

No references are associated with this feature.