Pseudomonas syringae pv. syringae B728a, Psyr_0210 (rpoZ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0210
Name
rpoZ
Replicon chromosome
Genomic location 225170 - 225433 (- strand)

Cross-References

RefSeq YP_233321.1
GI 66043480
EC Number 2.7.7.6
Entrez 3365686
INSDC AAY35283.1
NCBI Locus Tag Psyr_0210
UniParc UPI0000394F93
UniProtKB Acc Q4ZZY9
UniProtKB ID RPOZ_PSEU2
UniRef100 UniRef100_Q4ZZY9
UniRef50 UniRef50_Q4K3R3
UniRef90 UniRef90_Q4K3R3

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-directed RNA polymerase subunit omega
Synonyms
Evidence for Translation
Charge (pH 7) -9.79
Kyte-Doolittle Hydrophobicity Value -0.198
Molecular Weight (kDa) 9.7
Isoelectric Point (pI) 4.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 248 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004906 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0210
Search term: rpoZ

Human Homologs

References

No references are associated with this feature.