Pseudomonas syringae pv. syringae B728a, Psyr_0600

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_0600
Name
Replicon	chromosome
Genomic location	689229 - 690104 (+ strand)

Cross-References

RefSeq	YP_233708.1
GI	66043867
Entrez	3366078
INSDC	AAY35670.1
NCBI Locus Tag	Psyr_0600
UniParc	UPI00003959CC
UniProtKB Acc	Q4ZYV2
UniProtKB ID	Q4ZYV2_PSEU2
UniRef100	UniRef100_Q4ZYV2
UniRef50	UniRef50_G8Q4Y5
UniRef90	UniRef90_D7HTZ2

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter
Synonyms
Evidence for Translation
Charge (pH 7)	-2.20
Kyte-Doolittle Hydrophobicity Value	0.024
Molecular Weight (kDa)	32.3
Isoelectric Point (pI)	6.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004529 (504 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_0600 Search term: ABC transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000411096 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 2.0e-13 Percent Identity: 26.7
Ensembl 110, assembly GRCh38.p14	ENSP00000396789 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 2.0e-13 Percent Identity: 26.7
Ensembl 110, assembly GRCh38.p14	ENSP00000442634 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 2.0e-13 Percent Identity: 26.7

References