Pseudomonas syringae pv. syringae B728a, Psyr_1309

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_1309
Name
Replicon chromosome
Genomic location 1486002 - 1487006 (+ strand)

Cross-References

RefSeq YP_234398.1
GI 66044557
Entrez 3366804
INSDC AAY36360.1
NCBI Locus Tag Psyr_1309
UniParc UPI000039533C
UniProtKB Acc Q4ZWW2
UniProtKB ID Q4ZWW2_PSEU2
UniRef100 UniRef100_Q4ZWW2
UniRef50 UniRef50_Q886S7
UniRef90 UniRef90_Q886S7

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) -4.37
Kyte-Doolittle Hydrophobicity Value -0.284
Molecular Weight (kDa) 37.1
Isoelectric Point (pI) 5.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3I5A SIGNALING PROTEIN 07/03/09 Crystal structure of full-length WpsR from Pseudomonas syringae Pseudomonas syringae pv. tomato 2.796 X-RAY DIFFRACTION 94.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000167 (2758 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1309

Human Homologs

References

No references are associated with this feature.