Pseudomonas syringae pv. syringae B728a, Psyr_1388

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_1388
Name
Replicon chromosome
Genomic location 1570005 - 1570697 (- strand)

Cross-References

RefSeq YP_234477.1
GI 66044636
Entrez 3366883
INSDC AAY36439.1
NCBI Locus Tag Psyr_1388
UniParc UPI000039538C
UniProtKB Acc Q4ZWN3
UniProtKB ID Q4ZWN3_PSEU2
UniRef100 UniRef100_Q4ZWN3
UniRef50 UniRef50_Q9RPT0
UniRef90 UniRef90_S3MCH9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.65
Kyte-Doolittle Hydrophobicity Value -0.097
Molecular Weight (kDa) 25.7
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 243 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002240 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1388

Human Homologs

Ensembl 110, assembly GRCh38.p14
tRNA methyltransferase O [Source:HGNC Symbol;Acc:HGNC:30967]
E-value: 6.5e-31
Percent Identity: 49.6

References

No references are associated with this feature.