Pseudomonas syringae pv. syringae B728a, Psyr_1561

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_1561
Name
Replicon chromosome
Genomic location 1756261 - 1757952 (+ strand)

Cross-References

RefSeq YP_234647.2
GI 229170802
EC Number 1.1.1.40
Entrez 3367061
INSDC AAY36609.1
NCBI Locus Tag Psyr_1561
UniParc UPI000045CEBF
UniProtKB Acc Q4ZW63
UniProtKB ID MAO1_PSEU2
UniRef100 UniRef100_Q4ZW63
UniRef50 UniRef50_Q48LC8
UniRef90 UniRef90_Q48LC8

Product

Feature Type CDS
Coding Frame 1
Product Name
malate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -8.14
Kyte-Doolittle Hydrophobicity Value -0.086
Molecular Weight (kDa) 62.3
Isoelectric Point (pI) 5.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 504 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002170 (324 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1561

Human Homologs

Ensembl 110, assembly GRCh38.p14
malic enzyme 1 [Source:HGNC Symbol;Acc:HGNC:6983]
E-value: 5.5e-124
Percent Identity: 44.2

References

No references are associated with this feature.