Pseudomonas syringae pv. syringae B728a, Psyr_1565

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_1565
Name
Replicon chromosome
Genomic location 1761509 - 1762441 (+ strand)

Cross-References

RefSeq YP_234651.1
GI 66044810
Entrez 3367065
INSDC AAY36613.1
NCBI Locus Tag Psyr_1565
UniParc UPI0000395A33
UniProtKB Acc Q4ZW59
UniProtKB ID Q4ZW59_PSEU2
UniRef100 UniRef100_Q4ZW59
UniRef50 UniRef50_D7HXF1
UniRef90 UniRef90_D7HXF1

Product

Feature Type CDS
Coding Frame 1
Product Name
D-isomer specific 2-hydroxyacid dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.90
Kyte-Doolittle Hydrophobicity Value -0.014
Molecular Weight (kDa) 34269.9
Isoelectric Point (pI) 5.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 628 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001240 (513 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1565

Human Homologs

Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.7e-05
Percent Identity: 28.1

References

No references are associated with this feature.