Pseudomonas syringae pv. syringae B728a, Psyr_1738

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_1738
Name
Replicon	chromosome
Genomic location	1975218 - 1976333 (+ strand)

Cross-References

RefSeq	YP_234824.1
GI	66044983
Entrez	3367243
INSDC	AAY36786.1
NCBI Locus Tag	Psyr_1738
UniParc	UPI0000394E15
UniProtKB Acc	Q4ZVN6
UniProtKB ID	Q4ZVN6_PSEU2
UniRef100	UniRef100_Q4ZVN6
UniRef50	UniRef50_D7HXS5
UniRef90	UniRef90_D7HXS5

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter
Synonyms
Evidence for Translation
Charge (pH 7)	-5.89
Kyte-Doolittle Hydrophobicity Value	-0.157
Molecular Weight (kDa)	41.5
Isoelectric Point (pI)	5.84

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015627 (151 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_1738 Search term: ABC transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000467882 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 3.4e-21 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000467251 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 3.4e-21 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000467448 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 3.4e-21 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000376443 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 3.4e-21 Percent Identity: 31.8

References