Pseudomonas syringae pv. syringae B728a, Psyr_2011

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_2011
Name
Replicon	chromosome
Genomic location	2333942 - 2335378 (+ strand)

Cross-References

RefSeq	YP_235092.1
GI	66045251
EC Number	1.8.1.4
Entrez	3367525
INSDC	AAY37054.1
NCBI Locus Tag	Psyr_2011
UniParc	UPI0000394D1A
UniProtKB Acc	Q4ZUW8
UniProtKB ID	Q4ZUW8_PSEU2
UniRef100	UniRef100_Q4ZUW8
UniRef50	UniRef50_P14218
UniRef90	UniRef90_Q48K69

Product

Feature Type	CDS
Coding Frame	1
Product Name	dihydrolipoamide dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.70
Kyte-Doolittle Hydrophobicity Value	0.155
Molecular Weight (kDa)	50.1
Isoelectric Point (pI)	6.20

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 649 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003776 (538 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_2011 Search term: dihydrolipoamide dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000390667 dihydrolipoamide dehydrogenase [Source:HGNC Symbol;Acc:HGNC:2898] E-value: 9.8e-122 Percent Identity: 50.6
Ensembl 110, assembly GRCh38.p14	ENSP00000205402 dihydrolipoamide dehydrogenase [Source:HGNC Symbol;Acc:HGNC:2898] E-value: 9.8e-122 Percent Identity: 50.6

References