Pseudomonas syringae pv. syringae B728a, Psyr_2220

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_2220
Name
Replicon	chromosome
Genomic location	2579677 - 2581617 (- strand)

Cross-References

RefSeq	YP_235301.1
GI	66045460
Entrez	3367735
INSDC	AAY37263.1
NCBI Locus Tag	Psyr_2220
UniParc	UPI0000394C36
UniProtKB Acc	Q4ZUA9
UniProtKB ID	Q4ZUA9_PSEU2
UniRef100	UniRef100_Q4ZUA9
UniRef50	UniRef50_Q4ZUA9
UniRef90	UniRef90_Q4ZUA9

Product

Feature Type	CDS
Coding Frame	1
Product Name	histidine kinase, HAMP region:Cache: chemotaxis sensory transducer
Synonyms
Evidence for Translation
Charge (pH 7)	-9.38
Kyte-Doolittle Hydrophobicity Value	-0.168
Molecular Weight (kDa)	69.9
Isoelectric Point (pI)	5.55

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
6MNI	SIGNALING PROTEIN	10/01/18	Structure of the tandem CACHE domain of PscC	Pseudomonas syringae pv. actinidiae	1.696	X-RAY DIFFRACTION	90.6

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 410 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015121 (167 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_2220 Search term: histidine kinase, HAMP region:Cache: chemotaxis sensory transducer

Human Homologs

References