Pseudomonas syringae pv. syringae B728a, Psyr_2411

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_2411
Name
Replicon chromosome
Genomic location 2792418 - 2793278 (+ strand)

Cross-References

RefSeq YP_235488.1
GI 66045647
Entrez 3367926
INSDC AAY37450.1
NCBI Locus Tag Psyr_2411
UniParc UPI0000394B8C
UniProtKB Acc Q4ZTS2
UniProtKB ID Q4ZTS2_PSEU2
UniRef100 UniRef100_Q4ZTS2
UniRef50 UniRef50_I3XDQ8
UniRef90 UniRef90_Q48IL6

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -7.40
Kyte-Doolittle Hydrophobicity Value -0.232
Molecular Weight (kDa) 30.7
Isoelectric Point (pI) 4.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003332 (498 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2411

Human Homologs

Ensembl 110, assembly GRCh38.p14
3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]
E-value: 6.4e-28
Percent Identity: 33.7

References

No references are associated with this feature.