Pseudomonas syringae pv. syringae B728a, Psyr_2470

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_2470
Name
Replicon	chromosome
Genomic location	2863272 - 2864435 (- strand)

Cross-References

RefSeq	YP_235547.1
GI	66045706
EC Number	1.3.99.10
Entrez	3367987
INSDC	AAY37509.1
NCBI Locus Tag	Psyr_2470
UniParc	UPI0000395AF2
UniProtKB Acc	Q4ZTL3
UniProtKB ID	Q4ZTL3_PSEU2
UniRef100	UniRef100_Q4ZTL3
UniRef50	UniRef50_G8PXS5
UniRef90	UniRef90_G8PXS5

Product

Feature Type	CDS
Coding Frame	1
Product Name	isovaleryl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-5.91
Kyte-Doolittle Hydrophobicity Value	-0.167
Molecular Weight (kDa)	42.3
Isoelectric Point (pI)	5.31

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 484 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003424 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_2470 Search term: isovaleryl-CoA dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000418397 isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:6186] E-value: 2.4e-139 Percent Identity: 64.3
Ensembl 110, assembly GRCh38.p14	ENSP00000499074 isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:6186] E-value: 2.4e-139 Percent Identity: 64.3

References