Pseudomonas syringae pv. syringae B728a, Psyr_2471

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_2471
Name
Replicon chromosome
Genomic location 2865211 - 2866110 (- strand)

Cross-References

RefSeq YP_235548.1
GI 66045707
EC Number 4.1.3.4
Entrez 3367988
INSDC AAY37510.1
NCBI Locus Tag Psyr_2471
UniParc UPI000050D8A9
UniProtKB Acc Q4ZTL2
UniProtKB ID Q4ZTL2_PSEU2
UniRef100 UniRef100_Q4ZTL2
UniRef50 UniRef50_Q4K9P9
UniRef90 UniRef90_Q4ZTL2

Product

Feature Type CDS
Coding Frame 1
Product Name
hydroxymethylglutaryl-CoA lyase
Synonyms
Evidence for Translation
Charge (pH 7) -5.98
Kyte-Doolittle Hydrophobicity Value 0.063
Molecular Weight (kDa) 31.5
Isoelectric Point (pI) 5.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 355 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003428 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2471

Human Homologs

Ensembl 110, assembly GRCh38.p14
3-hydroxy-3-methylglutaryl-CoA lyase [Source:HGNC Symbol;Acc:HGNC:5005]
E-value: 2.9e-95
Percent Identity: 56.1

References

No references are associated with this feature.