Pseudomonas syringae pv. syringae B728a, Psyr_2514

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_2514
Name
Replicon	chromosome
Genomic location	2923886 - 2924599 (- strand)

Cross-References

RefSeq	YP_235591.1
GI	66045750
Entrez	3368031
INSDC	AAY37553.1
NCBI Locus Tag	Psyr_2514
UniParc	UPI00003957F8
UniProtKB Acc	Q4ZTG9
UniProtKB ID	SSUB1_PSEU2
UniRef100	UniRef100_Q4ZTG9
UniRef50	UniRef50_Q881U6
UniRef90	UniRef90_Q881U6

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter
Synonyms
Evidence for Translation
Charge (pH 7)	-2.35
Kyte-Doolittle Hydrophobicity Value	0.093
Molecular Weight (kDa)	26046.8
Isoelectric Point (pI)	6.40

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000182 (2426 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_2514 Search term: ABC transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000352135 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 2.1e-16 Percent Identity: 29.9
Ensembl 110, assembly GRCh38.p14	ENSP00000265723 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 2.1e-16 Percent Identity: 29.9
Ensembl 110, assembly GRCh38.p14	ENSP00000496956 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 2.1e-16 Percent Identity: 29.9
Ensembl 110, assembly GRCh38.p14	ENSP00000392983 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 2.1e-16 Percent Identity: 29.9

References