Pseudomonas syringae pv. syringae B728a, Psyr_3096

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3096
Name
Replicon chromosome
Genomic location 3711664 - 3712455 (+ strand)

Cross-References

RefSeq YP_236166.1
GI 66046325
Entrez 3368617
INSDC AAY38128.1
NCBI Locus Tag Psyr_3096
UniParc UPI0000395B53
UniProtKB Acc Q4ZRU4
UniProtKB ID Q4ZRU4_PSEU2
UniRef100 UniRef100_Q4ZRU4
UniRef50 UniRef50_D7I144
UniRef90 UniRef90_D7I144

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter
Synonyms
Evidence for Translation
Charge (pH 7) -1.14
Kyte-Doolittle Hydrophobicity Value 0.158
Molecular Weight (kDa) 28.2
Isoelectric Point (pI) 6.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018273 (42 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3096
Search term: ABC transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
E-value: 4.5e-20
Percent Identity: 32.4

References

No references are associated with this feature.