Pseudomonas syringae pv. syringae B728a, Psyr_3201

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3201
Name
Replicon chromosome
Genomic location 3831157 - 3832515 (+ strand)

Cross-References

RefSeq YP_236271.1
GI 66046430
EC Number 1.6.99.5
Entrez 3368723
INSDC AAY38233.1
NCBI Locus Tag Psyr_3201
UniParc UPI0000395D73
UniProtKB Acc Q4ZRI9
UniProtKB ID Q4ZRI9_PSEU2
UniRef100 UniRef100_Q4ZRI9
UniRef50 UniRef50_P31979
UniRef90 UniRef90_Q4K9T2

Product

Feature Type CDS
Coding Frame 1
Product Name
NADH dehydrogenase I subunit F
Synonyms
Evidence for Translation
Charge (pH 7) 0.42
Kyte-Doolittle Hydrophobicity Value -0.200
Molecular Weight (kDa) 48.8
Isoelectric Point (pI) 7.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 456 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002153 (868 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3201

Human Homologs

Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 2.5e-87
Percent Identity: 42.3
Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 2.5e-87
Percent Identity: 42.3
Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 2.5e-87
Percent Identity: 42.3
Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 2.5e-87
Percent Identity: 42.3

References

No references are associated with this feature.