Pseudomonas syringae pv. syringae B728a, Psyr_3353

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3353
Name
Replicon chromosome
Genomic location 4010342 - 4011874 (+ strand)

Cross-References

RefSeq YP_236423.1
GI 66046582
EC Number 1.11.1.6
Entrez 3368880
NCBI Locus Tag Psyr_3353

Product

Feature Type CDS
Coding Frame 1
Product Name
catalase
Synonyms
Evidence for Translation
Charge (pH 7) -0.13
Kyte-Doolittle Hydrophobicity Value -0.522
Molecular Weight (kDa) 56684.3
Isoelectric Point (pI) 6.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1M7S OXIDOREDUCTASE 07/22/02 Crystal Structure Analysis of Catalase CatF of Pseudomonas syringae Pseudomonas syringae 1.8 X-RAY DIFFRACTION 98.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 319 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001474 (1465 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3353
Search term: catalase

Human Homologs

Ensembl 110, assembly GRCh38.p14
catalase [Source:HGNC Symbol;Acc:HGNC:1516]
E-value: 7.0e-102
Percent Identity: 41.9

References

No references are associated with this feature.