Pseudomonas syringae pv. syringae B728a, Psyr_3579

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3579
Name
Replicon chromosome
Genomic location 4262499 - 4262912 (- strand)

Cross-References

RefSeq YP_236649.1
GI 66046808
Entrez 3369110
INSDC AAY38611.1
NCBI Locus Tag Psyr_3579
UniParc UPI00003959B9
UniProtKB Acc Q4ZQG1
UniProtKB ID Q4ZQG1_PSEU2
UniRef100 UniRef100_Q48G02
UniRef50 UniRef50_T2LBJ4
UniRef90 UniRef90_Q885L4

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidyl-tRNA hydrolase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 12.47
Kyte-Doolittle Hydrophobicity Value -0.460
Molecular Weight (kDa) 15.1
Isoelectric Point (pI) 11.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2JVA HYDROLASE 09/14/07 NMR solution structure of peptidyl-tRNA hydrolase domain protein from Pseudomonas syringae pv. tomato. Northeast Structural Genomics Consortium target PsR211 Pseudomonas syringae pv. tomato NOT SOLUTION NMR 97.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 283 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000835 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3579

Human Homologs

References

No references are associated with this feature.