Pseudomonas syringae pv. syringae B728a, Psyr_3876

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_3876
Name
Replicon chromosome
Genomic location 4616996 - 4617706 (+ strand)

Cross-References

RefSeq YP_236944.1
GI 66047103
Entrez 3369411
INSDC AAY38906.1
NCBI Locus Tag Psyr_3876
UniParc UPI0000395622
UniProtKB Acc Q4ZPL6
UniProtKB ID Q4ZPL6_PSEU2
UniRef100 UniRef100_Q4ZPL6
UniRef50 UniRef50_P0AEU5
UniRef90 UniRef90_Q4KH89

Product

Feature Type CDS
Coding Frame 1
Product Name
amino acid ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7) 5.58
Kyte-Doolittle Hydrophobicity Value 0.551
Molecular Weight (kDa) 26.7
Isoelectric Point (pI) 9.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 441 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002652 (449 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3876

Human Homologs

References

No references are associated with this feature.