Pseudomonas syringae pv. syringae B728a, Psyr_3901

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3901
Name
Replicon chromosome
Genomic location 4642209 - 4643129 (+ strand)

Cross-References

RefSeq YP_236969.1
GI 66047128
EC Number 2.1.3.3
Entrez 3369436
INSDC AAY38931.1
NCBI Locus Tag Psyr_3901
UniParc UPI000050DA57
UniProtKB Acc Q4ZPJ1
UniProtKB ID Q4ZPJ1_PSEU2
UniRef100 UniRef100_Q4ZPJ1
UniRef50 UniRef50_Q02047
UniRef90 UniRef90_Q02047

Product

Feature Type CDS
Coding Frame 1
Product Name
ornithine carbamoyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -1.98
Kyte-Doolittle Hydrophobicity Value -0.138
Molecular Weight (kDa) 34.1
Isoelectric Point (pI) 6.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 649 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002129 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3901

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine transcarbamylase [Source:HGNC Symbol;Acc:HGNC:8512]
E-value: 3.1e-60
Percent Identity: 41.0

References

No references are associated with this feature.