Strain |
Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest |
Locus Tag |
Psyr_3958
|
Name |
algU
|
Replicon | chromosome |
Genomic location | 4706018 - 4706599 (- strand) |
RefSeq | YP_237026.1 |
GI | 66047185 |
Entrez | 3369493 |
INSDC | AAY38988.1 |
NCBI Locus Tag | Psyr_3958 |
UniParc | UPI00000B3363 |
UniProtKB Acc | Q4ZPD4 |
UniProtKB ID | Q4ZPD4_PSEU2 |
UniRef100 | UniRef100_F3ELT6 |
UniRef50 | UniRef50_D0ZSY9 |
UniRef90 | UniRef90_Q06198 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma factor AlgU
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -5.83 |
Kyte-Doolittle Hydrophobicity Value | -0.470 |
Molecular Weight (kDa) | 22.3 |
Isoelectric Point (pI) | 5.16 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6IN7 | TRANSCRIPTION | 10/24/18 | Crystal structure of AlgU in complex with MucA(cyto) | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.96 | X-RAY DIFFRACTION | 90.2 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 489 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000736 (532 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: Psyr_3958
Search term: algU
Search term: RNA polymerase sigma factor AlgU
|