Pseudomonas syringae pv. syringae B728a, Psyr_3970

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_3970
Name
Replicon	chromosome
Genomic location	4718010 - 4718702 (- strand)

Cross-References

RefSeq	YP_237038.1
GI	66047197
Entrez	3369505
INSDC	AAY39000.1
NCBI Locus Tag	Psyr_3970
UniParc	UPI0000395CCA
UniProtKB Acc	Q4ZPC2
UniProtKB ID	UNG_PSEU2
UniRef100	UniRef100_Q4ZPC2
UniRef50	UniRef50_Q8X444
UniRef90	UniRef90_Q87XE2

Product

Feature Type	CDS
Coding Frame	1
Product Name	uracil-DNA glycosylase
Synonyms
Evidence for Translation
Charge (pH 7)	2.81
Kyte-Doolittle Hydrophobicity Value	-0.343
Molecular Weight (kDa)	25.7
Isoelectric Point (pI)	7.83

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 352 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000724 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_3970 Search term: uracil-DNA glycosylase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000337398 uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572] E-value: 4.6e-61 Percent Identity: 50.9
Ensembl 110, assembly GRCh38.p14	ENSP00000242576 uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572] E-value: 4.6e-61 Percent Identity: 50.9

References