Pseudomonas syringae pv. syringae B728a, Psyr_3981

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3981
Name
Replicon chromosome
Genomic location 4734188 - 4734880 (+ strand)

Cross-References

RefSeq YP_237049.1
GI 66047208
Entrez 3369516
INSDC AAY39011.1
NCBI Locus Tag Psyr_3981
UniParc UPI000050DA76
UniProtKB Acc Q4ZPB1
UniProtKB ID Q4ZPB1_PSEU2
UniRef100 UniRef100_Q4ZPB1
UniRef50 UniRef50_Q9I5J6
UniRef90 UniRef90_S3MJH4

Product

Feature Type CDS
Coding Frame 1
Product Name
pseudouridine synthase, Rsu
Synonyms
Evidence for Translation
Charge (pH 7) 2.10
Kyte-Doolittle Hydrophobicity Value -0.432
Molecular Weight (kDa) 26208.7
Isoelectric Point (pI) 7.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 578 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000709 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3981

Human Homologs

References

No references are associated with this feature.