Pseudomonas syringae pv. syringae B728a, Psyr_4241

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4241
Name
Replicon chromosome
Genomic location 5053563 - 5054531 (+ strand)

Cross-References

RefSeq YP_237309.1
GI 66047468
Entrez 3369781
INSDC AAY39271.1
NCBI Locus Tag Psyr_4241
UniParc UPI00003954F0
UniProtKB Acc Q4ZNK1
UniProtKB ID Q4ZNK1_PSEU2
UniRef100 UniRef100_Q4ZNK1
UniRef50 UniRef50_G8AUW9
UniRef90 UniRef90_W0MLY2

Product

Feature Type CDS
Coding Frame 1
Product Name
oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.71
Kyte-Doolittle Hydrophobicity Value 0.078
Molecular Weight (kDa) 34.8
Isoelectric Point (pI) 5.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004092 (509 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4241

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 2.2e-16
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 2.2e-16
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 2.2e-16
Percent Identity: 32.6

References

No references are associated with this feature.