Pseudomonas syringae pv. syringae B728a, Psyr_4367

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4367
Name
Replicon chromosome
Genomic location 5220956 - 5221342 (- strand)

Cross-References

RefSeq YP_237435.1
GI 66047594
Entrez 3369907
INSDC AAY39397.1
NCBI Locus Tag Psyr_4367
UniParc UPI000039547B
UniProtKB Acc Q4ZN75
UniProtKB ID Q4ZN75_PSEU2
UniRef100 UniRef100_F3EHP5
UniRef50 UniRef50_Q87VV8
UniRef90 UniRef90_Q87VV8

Product

Feature Type CDS
Coding Frame 1
Product Name
Iojap-related protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.32
Kyte-Doolittle Hydrophobicity Value -0.227
Molecular Weight (kDa) 13.9
Isoelectric Point (pI) 4.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 565 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001678 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4367

Human Homologs

Ensembl 110, assembly GRCh38.p14
mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
E-value: 2.7e-10
Percent Identity: 32.7

References

No references are associated with this feature.