Pseudomonas syringae pv. syringae B728a, Psyr_4532 (rplR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4532
Name
rplR
Replicon chromosome
Genomic location 5395385 - 5395735 (- strand)

Cross-References

RefSeq YP_237600.1
GI 66047759
Entrez 3370072
INSDC AAY39562.1
NCBI Locus Tag Psyr_4532
UniParc UPI00000084F7
UniProtKB Acc Q4ZMR0
UniProtKB ID RL18_PSEU2
UniRef100 UniRef100_Q48D52
UniRef50 UniRef50_Q9RSL2
UniRef90 UniRef90_Q4K549

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L18
Synonyms
Evidence for Translation
Charge (pH 7) 11.92
Kyte-Doolittle Hydrophobicity Value -0.283
Molecular Weight (kDa) 12.6
Isoelectric Point (pI) 11.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001463 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4532
Search term: rplR

Human Homologs

References

No references are associated with this feature.