Pseudomonas syringae pv. syringae B728a, Psyr_4638

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4638
Name
Replicon chromosome
Genomic location 5498278 - 5499303 (- strand)

Cross-References

RefSeq YP_237706.1
GI 66047865
EC Number 3.4.24.57
Entrez 3370187
INSDC AAY39668.1
NCBI Locus Tag Psyr_4638
UniParc UPI0000395778
UniProtKB Acc Q4ZMF4
UniProtKB ID TSAD_PSEU2
UniRef100 UniRef100_Q4ZMF4
UniRef50 UniRef50_Q4K4W4
UniRef90 UniRef90_Q4K4W4

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding/iron metalloprotein/AP endonuclease
Synonyms
Evidence for Translation
Charge (pH 7) -9.56
Kyte-Doolittle Hydrophobicity Value 0.061
Molecular Weight (kDa) 36.5
Isoelectric Point (pI) 4.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 665 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000563 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4638

Human Homologs

Ensembl 110, assembly GRCh38.p14
O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]
E-value: 5.5e-42
Percent Identity: 34.0
Ensembl 110, assembly GRCh38.p14
O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]
E-value: 5.5e-42
Percent Identity: 34.0

References

No references are associated with this feature.