Pseudomonas syringae pv. syringae B728a, Psyr_4696

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4696
Name
Replicon chromosome
Genomic location 5564427 - 5565446 (- strand)

Cross-References

RefSeq YP_237761.1
GI 66047920
Entrez 3370246
INSDC AAY39723.1
NCBI Locus Tag Psyr_4696
UniParc UPI000050DB47
UniProtKB Acc Q4ZM99
UniProtKB ID Q4ZM99_PSEU2
UniRef100 UniRef100_Q4ZM99
UniRef50 UniRef50_E2XTN4
UniRef90 UniRef90_Q88AA7

Product

Feature Type CDS
Coding Frame 1
Product Name
periplasmic binding protein/LacI transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.74
Kyte-Doolittle Hydrophobicity Value 0.004
Molecular Weight (kDa) 36.9
Isoelectric Point (pI) 6.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 376 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017277 (58 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4696

Human Homologs

References

No references are associated with this feature.