Pseudomonas syringae pv. syringae B728a, Psyr_4784

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4784
Name
Replicon chromosome
Genomic location 5672647 - 5673624 (- strand)

Cross-References

RefSeq YP_237849.1
GI 66048008
Entrez 3370334
INSDC AAY39811.1
NCBI Locus Tag Psyr_4784
UniParc UPI0000395717
UniProtKB Acc Q4ZM11
UniProtKB ID Q4ZM11_PSEU2
UniRef100 UniRef100_Q4ZM11
UniRef50 UniRef50_I1EZS2
UniRef90 UniRef90_G8Q2F1

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidase M19
Synonyms
Evidence for Translation
Charge (pH 7) -7.80
Kyte-Doolittle Hydrophobicity Value -0.146
Molecular Weight (kDa) 36.0
Isoelectric Point (pI) 5.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2I5G HYDROLASE 08/24/06 Crystal strcuture of amidohydrolase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 90.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 277 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004953 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4784
Search term: peptidase M19

Human Homologs

Ensembl 110, assembly GRCh38.p14
dipeptidase 2 [Source:HGNC Symbol;Acc:HGNC:23028]
E-value: 6.0e-22
Percent Identity: 25.1
Ensembl 110, assembly GRCh38.p14
dipeptidase 2 [Source:HGNC Symbol;Acc:HGNC:23028]
E-value: 6.0e-22
Percent Identity: 25.1

References

No references are associated with this feature.