Pseudomonas syringae pv. syringae B728a, Psyr_4846

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4846
Name
Replicon chromosome
Genomic location 5752274 - 5753788 (- strand)

Cross-References

RefSeq YP_237911.1
GI 66048070
EC Number 4.3.1.19
Entrez 3370396
INSDC AAY39873.1
NCBI Locus Tag Psyr_4846
UniParc UPI00003956CC
UniProtKB Acc Q4ZLU9
UniProtKB ID Q4ZLU9_PSEU2
UniRef100 UniRef100_Q4ZLU9
UniRef50 UniRef50_Q9I418
UniRef90 UniRef90_Q87UK8

Product

Feature Type CDS
Coding Frame 1
Product Name
threonine dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -11.25
Kyte-Doolittle Hydrophobicity Value -0.110
Molecular Weight (kDa) 55.2
Isoelectric Point (pI) 5.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 613 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000323 (843 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4846

Human Homologs

Ensembl 110, assembly GRCh38.p14
serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
E-value: 8.1e-42
Percent Identity: 35.6

References

No references are associated with this feature.