Pseudomonas syringae pv. syringae B728a, Psyr_5014

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_5014
Name
Replicon chromosome
Genomic location 5955010 - 5956191 (- strand)

Cross-References

RefSeq YP_238079.1
GI 66048238
Entrez 3370572
INSDC AAY40041.1
NCBI Locus Tag Psyr_5014
UniParc UPI0000394E55
UniProtKB Acc Q4ZLD1
UniProtKB ID Q4ZLD1_PSEU2
UniRef100 UniRef100_Q4ZLD1
UniRef50 UniRef50_Q92947
UniRef90 UniRef90_Q4KKG4

Product

Feature Type CDS
Coding Frame 1
Product Name
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal
Synonyms
Evidence for Translation
Charge (pH 7) -5.48
Kyte-Doolittle Hydrophobicity Value -0.145
Molecular Weight (kDa) 43.1
Isoelectric Point (pI) 5.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 468 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000438 (545 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_5014

Human Homologs

Ensembl 97, assembly GRCh38.p12
glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189]
E-value: 2.2e-144
Percent Identity: 64.1
Ensembl 97, assembly GRCh38.p12
glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189]
E-value: 2.2e-144
Percent Identity: 64.1

References

No references are associated with this feature.